NeuroElectro Publications

About Neuron Types Electrophysiology Properties Articles FAQs Data/API Get Involved

Article: Protein Crowding within the Postsynaptic Density Can Impede the Escape of Membrane Proteins.

Full Text (publisher's website) ; Article Metadata ; Article Data (extracted)
Li TP; Song Y; MacGillavry HD; Blanpied TA; Raghavachari S
J. Neurosci., 2016

Table 1.

Simulation parameters

	Value	Study
PSD-95 radius	2.5 nm	Chen et al. (2008)
NMDAR radius	8 nm	Chen et al. (2008)
Adhesion molecules, radii	3-8 nm	This work^{^a}
Other immobile proteins, radii	5-10 nm	This work^{^a}
NMDAR number	20	Cheng et al. (2006)
Adhesion molecule number	48	Cheng et al. (2006)
Other immobile protein number	15	Cheng et al. (2006)
Diameter of PSD	140-400 nm	MacGillavry et al. (2013)
AMPAR number within a synapse	100	Matsuzaki et al. (2001)
AMPAR diffusion constant	0.2 μm²/s	Ehlers et al. (2007)

↵^aRadii of assumed unstructured conformations were deduced from total counts of amino acids based on the radius of gyration estimates of peptide chains by Kohn et al. (2004).

Report miscurated data

Inferred neuron-electrophysiology data values

Neuron Type	Neuron Description	Ephys Prop	Extracted Value	Standardized Value	Content Source